New Way to Harvest Energy from Sunlight

New Way to Harvest Energy from Sunlight

  9:37:00 AM    Science Lover

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Professor Richard Watt and his chemistry students suspected that a common protein could potentially react with sunlight and harvest its energy -- similar to what chlorophyll does during photosynthesis.

BYU chemistry professor Richard Watt. (Credit: Image courtesy of Brigham Young University)

The story of how they proved it sounds as colorful as the legend of the leprechaun who hid his pot of gold at the end of the rainbow.

They started with citric acid from oranges and mixed it with the protein. Next they dissolved gold powder into the solution. Then they put vials of the yellow-colored mixture in direct sunlight and crossed their fingers in the hope that it would turn purple.

Here's the reason why: If it turned purple, that would signal that the gold atoms had received electrons and used the donated energy to bunch together as small, purple-colored nanoparticles. And that would mean that the protein used the sunlight to excite the citric acid and trigger a transfer of energy.

While direct sunlight did the trick in about 20 minutes, a high-powered tungsten mercury lamp worked much faster.

"We set the system up, turned on the light, and the solution turned purple," Watt said. "We knew that we'd proved the concept."

The beauty of this experiment lies not in its colors -- unless, of course, you're thinking of it as a potential "green" energy source that keeps the environment clean.

The BYU researchers published their experiments in the Journal of Nanoparticle Research. The final step of this project will involve connecting the protein to an electrode to channel the energy into a battery or fuel cell. The BYU chemists will partner with Jae-Woo Kim of the National Institute of Aerospace for this next stage of the work.

Professor Watt's pedigree includes a post-doc at Princeton, a father who developed a fuel cell that runs on sugar and weed-killer and a more distant ancestor credited with inventing the first practical steam engine. That ancestor is also the Scottish engineer for whom the unit of power "watt" is named.

Co-authors on the new study include BYU graduate Jeremiah Keyes, grad student Robert Hilton and Jeff Farrer, who runs an electron microscope lab at BYU.

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New Reactor to Make Fuel from Sunlight

New Reactor to Make Fuel from Sunlight

  8:13:00 PM    Science Lover

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Using a common metal most famously found in self-cleaning ovens, Sossina Haile hopes to change our energy future. The metal is cerium oxide -- or ceria -- and it is the centerpiece of a promising new technology developed by Haile and her colleagues that concentrates solar energy and uses it to efficiently convert carbon dioxide and water into fuels.

Sossina Haile and William Chueh stand next to the 
benchtop thermochemical reactor used to screen 
materials for implementation on the solar reactor. 
(Credit: Courtesy of Caltech)

Solar energy has long been touted as the solution to our energy woes, but while it is plentiful and free, it can't be bottled up and transported from sunny locations to the drearier -- but more energy-hungry -- parts of the world. The process developed by Haile -- a professor of materials science and chemical engineering at the California Institute of Technology (Caltech) -- and her colleagues could make that possible.

The researchers designed and built a two-foot-tall prototype reactor that has a quartz window and a cavity that absorbs concentrated sunlight. The concentrator works "like the magnifying glass you used as a kid" to focus the sun's rays, says Haile.

At the heart of the reactor is a cylindrical lining of ceria. Ceria -- a metal oxide that is commonly embedded in the walls of self-cleaning ovens, where it catalyzes reactions that decompose food and other stuck-on gunk -- propels the solar-driven reactions. The reactor takes advantage of ceria's ability to "exhale" oxygen from its crystalline framework at very high temperatures and then "inhale" oxygen back in at lower temperatures.

"What is special about the material is that it doesn't release all of the oxygen. That helps to leave the framework of the material intact as oxygen leaves," Haile explains. "When we cool it back down, the material's thermodynamically preferred state is to pull oxygen back into the structure."

Specifically, the inhaled oxygen is stripped off of carbon dioxide (CO2) and/or water (H2O) gas molecules that are pumped into the reactor, producing carbon monoxide (CO) and/or hydrogen gas (H2). H2 can be used to fuel hydrogen fuel cells; CO, combined with H2, can be used to create synthetic gas, or "syngas," which is the precursor to liquid hydrocarbon fuels. Adding other catalysts to the gas mixture, meanwhile, produces methane. And once the ceria is oxygenated to full capacity, it can be heated back up again, and the cycle can begin anew.

For all of this to work, the temperatures in the reactor have to be very high -- nearly 3,000 degrees Fahrenheit. At Caltech, Haile and her students achieved such temperatures using electrical furnaces. But for a real-world test, she says, "we needed to use photons, so we went to Switzerland." At the Paul Scherrer Institute's High-Flux Solar Simulator, the researchers and their collaborators -- led by Aldo Steinfeld of the institute's Solar Technology Laboratory -- installed the reactor on a large solar simulator capable of delivering the heat of 1,500 suns.

In experiments conducted last spring, Haile and her colleagues achieved the best rates for CO2 dissociation ever achieved, "by orders of magnitude," she says. The efficiency of the reactor was uncommonly high for CO2 splitting, in part, she says, "because we're using the whole solar spectrum, and not just particular wavelengths." And unlike in electrolysis, the rate is not limited by the low solubility of CO2 in water. Furthermore, Haile says, the high operating temperatures of the reactor mean that fast catalysis is possible, without the need for expensive and rare metal catalysts (cerium, in fact, is the most common of the rare earth metals -- about as abundant as copper).

In the short term, Haile and her colleagues plan to tinker with the ceria formulation so that the reaction temperature can be lowered, and to re-engineer the reactor, to improve its efficiency. Currently, the system harnesses less than 1% of the solar energy it receives, with most of the energy lost as heat through the reactor's walls or by re-radiation through the quartz window. "When we designed the reactor, we didn't do much to control these losses," says Haile. Thermodynamic modeling by lead author and former Caltech graduate student William Chueh suggests that efficiencies of 15% or higher are possible.

Ultimately, Haile says, the process could be adopted in large-scale energy plants, allowing solar-derived power to be reliably available during the day and night. The CO2 emitted by vehicles could be collected and converted to fuel, "but that is difficult," she says. A more realistic scenario might be to take the CO2 emissions from coal-powered electric plants and convert them to transportation fuels. "You'd effectively be using the carbon twice," Haile explains. Alternatively, she says, the reactor could be used in a "zero CO2 emissions" cycle: H2O and CO2 would be converted to methane, would fuel electricity-producing power plants that generate more CO2 and H2O, to keep the process going.

The work was funded by the National Science Foundation, the State of Minnesota Initiative for Renewable Energy and the Environment, and the Swiss National Science Foundation.

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Birds of a feather? Your genes help you select friends

Birds of a feather? Your genes help you select friends

  10:25:00 AM    Science Lover

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Vices attract while virtues repel people, according to a new study, which has found that genetic make-up plays a part in who one chooses as friends.

Researchers have found that people partly choose their friends by their genes especially those that have a big impact on their behaviour sometimes it can be a case of "opposites attract'' while sometimes "birds of a feather flock together". To research the conclusion, a team, led by James Fowler at University of California, used data from two large health studies to search for genetic links to friendship.

OF HUMAN BONDAGE

The researchers identified genetic markers, or genotypes, in six specific genes and looked at how often they occurred among friends. They found two clear examples where "birds of a feather flock together" and "opposites attract". The first involved a variant of the gene DRD2 which has been associated with alcoholism. People who carried the DRD2 genotype tended to befriend others with the same marker. Those who lacked the marker were also more likely to be friends with one another.

A less obvious opposite association was seen between people with a version of the gene CYP2A6linked to having an "open" personality. In this case, people with the genetic marker gravitated towards individuals who did not have it.

The findings, published in the 'Proceedings of the National Academy of Sciences' journal, remained significant after taking account of people's tendency to form "local" friendships within the same geographical area.

"An important implication of these results is that genetic structure in human populations may result not only from the formation of reproductive unions, but also from the formation of friendship unions within• a population," said the researchers in a statement on Tuesday.

Human evolution may to some extent have been shaped by interactions between genes and friendship choices." The human evolutionary environment is not limited to the physical and biological environment, but also includes the social environment, which may itself be an evolutionary force," they Said.

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LCD Projector Used to Control Brain and Muscles of Tiny Organisms Such as Worms

LCD Projector Used to Control Brain and Muscles of Tiny Organisms Such as Worms

  10:22:00 AM    Science Lover

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Researchers are using inexpensive components from ordinary liquid crystal display (LCD) projectors to control the brain and muscles of tiny organisms, including freely moving worms. Red, green and blue lights from a projector activate light-sensitive microbial proteins that are genetically engineered into the worms, allowing the researchers to switch neurons on and off like light bulbs and turn muscles on and off like engines.

Hang Lu, an associate professor in the School of Chemical 
& Biomolecular Engineering at Georgia Tech, and her 
graduate students Jeffrey Stirman (left) and Matthew Crane 
are using inexpensive LCD projectors to control the brain 
and muscles of tiny organisms, including freely moving 
worms. (Credit: Georgia Tech/Gary Meek)

Use of the LCD technology to control small animals advances the field of optogenetics -- a mix of optical and genetic techniques that has given researchers unparalleled control over brain circuits in laboratory animals. Until now, the technique could be used only with larger animals by placement of an optical fiber into an animal's brain, or required illumination of an animal's entire body.

A paper published Jan. 9 in the advance online edition of the journal Nature Methods describes how the inexpensive illumination technology allows researchers to stimulate and silence specific neurons and muscles of freely moving worms, while precisely controlling the location, duration, frequency and intensity of the light.

"This illumination instrument significantly enhances our ability to control, alter, observe and investigate how neurons, muscles and circuits ultimately produce behavior in animals," said Hang Lu, an associate professor in the School of Chemical & Biomolecular Engineering at the Georgia Institute of Technology.

Lu and graduate students Jeffrey Stirman and Matthew Crane developed the tool with support from the National Institutes of Health and the Alfred P. Sloan Foundation.

The illumination system includes a modified off-the-shelf LCD projector, which is used to cast a multi-color pattern of light onto an animal. The independent red, green and blue channels allow researchers to activate excitable cells sensitive to specific colors, while simultaneously silencing others.

"Because the central component of the illumination system is a commercially available projector, the system's cost and complexity are dramatically reduced, which we hope will enable wider adoption of this tool by the research community," explained Lu.

By connecting the illumination system to a microscope and combining it with video tracking, the researchers are able to track and record the behavior of freely moving animals, while maintaining the lighting in the intended anatomical position. When the animal moves, changes to the light's location, intensity and color can be updated in less than 40 milliseconds.

Once Lu and her team built the prototype system, they used it to explore the "touch" circuit of the worm Caenorhabditis elegans by exciting and inhibiting its mechano-sensory and locomotion neurons. Alexander Gottschalk, a professor in the Johann Wolfgang Goethe-University Frankfurt Institute of Biochemistry in Frankfurt, Germany, and his team provided the light-sensitive optogenetic reagents for the Georgia Tech experiments.

For their first experiment, the researchers illuminated the head of a worm at regular intervals while the animal moved forward. This produced a coiling effect in the head and caused the worm to crawl in a triangular pattern. In another experiment, the team scanned light along the bodies of worms from head to tail, which resulted in backward movement when neurons near the head were stimulated and forward movement when neurons near the tail were stimulated.

Additional experiments showed that the intensity of the light affected a worm's behavior and that several optogenetic reagents excited at different wavelengths could be combined in one experiment to understand circuit functions. The researchers were able to examine a large number of animals under a variety of conditions, demonstrating that the technique's results were both robust and repeatable.

"This instrument allowed us to control defined events in defined locations at defined times in an intact biological system, allowing us to dissect animal functional circuits with greater precision and nuance," added Lu.

While these proof-of-concept studies investigated the response of C. elegans to mechanical stimulation, the illumination system can also be used to evaluate responses to chemical, thermal and visual stimuli. Researchers can also use it to study a variety of neurons and muscles in other small animals, such as the zebrafish and fruit fly larvae.

"Experiments with this illumination system yield quantitative behavior data that cannot be obtained by manual touch assays, laser cell ablation, or genetic manipulation of neurotransmitters," said Lu.

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Gesturing While Talking Helps Change Your Thoughts

Gesturing While Talking Helps Change Your Thoughts

  9:47:00 AM    Science Lover

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Sometimes it’s almost impossible to talk without using your hands. These gestures seem to be important to how we think. They provide a visual clue to our thoughts and, a new theory suggests, may even change our thoughts by grounding them in action.

Sometimes it's almost impossible to talk without using your hands. These gestures seem to be important to how we think. They provide a visual clue to our thoughts and, a new theory suggests, may even change our thoughts by grounding them in action. (Credit: iStockphoto/Franz Pfluegl)

University of Chicago psychological scientists Sian Beilock and Susan Goldin-Meadow are bringing together two lines of research: Beilock’s work on how action affects thought and Goldin-Meadow’s work on gesture. After a chat at a conference instigated by Ed Diener, the founding editor of Perspectives on Psychological Science, they designed a study together to look at how gesture affects thought.

For the study, published in Psychological Science, a journal of the Association for Psychological Science, Beilock and Goldin-Meadow had volunteers solve a problem known as the Tower of Hanoi. It’s a game in which you have to move stacked disks from one peg to another. After they finished, the volunteers were taken into another room and asked to explain how they did it. (This is virtually impossible to explain without using your hands.) Then the volunteers tried the task again. But there was a trick: For some people, the weight of the disks had secretly changed, such that the smallest disk, which used to be light enough to move with one hand, now needed two hands.

People who had used one hand in their gestures when talking about moving the small disk were in trouble when that disk got heavier. They took longer to complete the task than did people who used two hands in their gestures—and the more one-handed gestures they used, the longer they took. This shows that how you gesture affects how you think; Goldin-Meadow and Beilock suggest that the volunteers had cemented how to solve the puzzle in their heads by gesturing about it (and were thrown off by the invisible change in the game).



In another version of the experiment, published in Perspectives in Psychological Science, the volunteers were not asked to explain their solution; instead, they solved the puzzle a second time before the disk weights were changed. But moving the disks didn’t affect performance in the way that gesturing about the disks did. The people who gestured did worse after the disk weights switched, but the people who moved the disks did not—they did just as well as before. “Gesture is a special case of action. You might think it would have less effect because it does not have a direct impact on the world,” says Goldin-Meadow. But she and Beilock think it may actually be having a stronger effect, “because gesturing about an act requires you to represent that act.” You aren’t just reaching out and handling the thing you’re talking about; you have to abstract from it, indicating it by a movement of your hands.

In the article published in Perspectives in Psychological Science, the two authors review the research on action, gesture, and thought. Gestures make thought concrete, bringing movement to the activity that’s going on in your mind.

This could be useful in education; Goldin-Meadow and Beilock have been working on helping children to understand abstract concepts in mathematics, physics, and chemistry by using gesture. “When you’re talking about angular momentum and torque, you’re talking about concepts that have to do with action,” Beilock says. “I’m really interested in whether getting kids to experience some of these actions or gesture about them might change the brain processes they use to understand these concepts.” But even in math where the concepts have little to do with action, gesturing helps children learn—maybe because the gestures themselves are grounded in action.

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First romantic kiss is more memorable than losing virginity

First romantic kiss is more memorable than losing virginity

  7:07:00 PM    Science Lover

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Be it behind the bike sheds or at the school disco, you are more likely to remember your first romantic kiss with your partner than even loosing your virginity.

First romantic kiss

Scientists have claimed that most of us can recall 90% of the details of the experience a memory more vivid than losing their virginity, reports the Daily Mail. But, the art is so complex that scientist Sheril Kirshenbaum has written a book about it.

In 'The Science of Kissing: What Our Lips Are Telling Us', Kirshenbaum writes men see kissing "as a means to an end" and possibly with a "view to swapping other bodily fluids later." Women try to "extricate the significance of a relationship based on a single kiss and often that leads to miscommunication." Men are more aggressive kissers, as they are trying to pass on a "testosterone bomb" to a lover.

But, testosterone passed on during smaller, frequent kissing sessions stays in the body longer, andean push a woman to falling in love more quickly.

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Why it's not good to forgive partner for all offences

Why it's not good to forgive partner for all offences

  10:03:00 AM    Science Lover

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Everyone may advice you to forgive your partner's bad behaviour, but in some cases, it may be better to hold a grudge against your transgressing spouse, a new study has suggested.

Newlyweds who forgive their partner's bad 
behaviour are more likely to face additional 
bad behavior next day, says a study

Newlyweds who forgave their partner's bad behaviour were more likely to face additional bad behaviour the next day compared with those who stayed mad, a study of newlyweds the University of Tennessee. Hearing "it's okay, honey," may be just the fuel the transgressing spouse needs for more lapses of judgement, study author James McNulty said, adding the benefits of forgiveness may need to be weighed against the risks.

"You may feel better if you forgive me," McNulty told Live Science. "But the question is, what happens down the road?" So it's likely that the unforgiven spouses behaved better in an attempt to get out of the dog house, he said.

For his research McNulty asked 135 newlywed couples to fill out individual relationship diaries every day for a week. The diaries included a questionnaire about whether the person's spouse had done something to upset them, and whether they'd forgiven their spouse for the transgression.

Overall, spouses who forgave their partners were almost twice as likely to report that their partner misbehaved the next day as those who held a grudge, McNulty found. However, in a second study that has not yet published, McNulty followed couples for four years and the results showed a similar pattern. However, McNulty said the fmdings don't suggest that forgiveness is always bad, nor is it a given that forgiving someone will turn you into a doormat.

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Emotional Signals Are Chemically Encoded in Tears, Researchers Find

Emotional Signals Are Chemically Encoded in Tears, Researchers Find

  9:47:00 AM    Science Lover

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Emotional crying is a universal, uniquely human behavior. When we cry, we clearly send all sorts of emotional signals. In a paper published online January 6 in Science Express, scientists at the Weizmann Institute have demonstrated that some of these signals are chemically encoded in the tears themselves. Specifically, they found that merely sniffing a woman's tears -- even when the crying woman is not present -- reduces sexual arousal in men.

Scientists have found that certain emotional signals are chemically encoded in tears. (Credit: iStockphoto/Arpad Nagy-Bagoly)

Humans, like most animals, expel various compounds in body fluids that give off subtle messages to other members of the species. A number of studies in recent years, for instance, have found that substances in human sweat can carry a surprising range of emotional and other signals to those who smell them.

But tears are odorless. In fact, in a first experiment led by Shani Gelstein, Yaara Yeshurun and their colleagues in the lab of Prof. Noam Sobel in the Weizmann Institute's Neurobiology Department, the researchers first obtained emotional tears from female volunteers watching sad movies in a secluded room and then tested whether men could discriminate the smell of these tears from that of saline. The men could not.

In a second experiment, male volunteers sniffed either tears or a control saline solution, and then had these applied under their nostrils on a pad while they made various judgments regarding images of women's faces on a computer screen. The next day, the test was repeated -- the men who were previously exposed to tears getting saline and vice versa. The tests were double blinded, meaning neither the men nor the researchers performing the trials knew what was on the pads. The researchers found that sniffing tears did not influence the men's estimates of sadness or empathy expressed in the faces. To their surprise, however, sniffing tears negatively affected the sex appeal attributed to the faces.

To further explore the finding, male volunteers watched emotional movies after similarly sniffing tears or saline. Throughout the movies, participants were asked to provide self-ratings of mood as they were being monitored for such physiological measures of arousal as skin temperature, heart rate, etc. Self-ratings showed that the subjects' emotional responses to sad movies were no more negative when exposed to women's tears, and the men "smelling" tears showed no more empathy. They did, however, rate their sexual arousal a bit lower. The physiological measures, however, told a clearer story. These revealed a pronounced tear-induced drop in physiological measures of arousal, including a significant dip in testosterone -- a hormone related to sexual arousal.

Finally, in a fourth trial, Sobel and his team repeated the previous experiment within an fMRI machine that allowed them to measure brain activity. The scans revealed a significant reduction in activity levels in brain areas associated with sexual arousal after the subjects had sniffed tears.

Sobel said, "This study raises many interesting questions. What is the chemical involved? Do different kinds of emotional situations send different tear-encoded signals? Are women's tears different from, say, men's tears? Children's tears? This study reinforces the idea that human chemical signals -- even ones we're not conscious of -- affect the behavior of others."

Human emotional crying was especially puzzling to Charles Darwin, who identified functional antecedents to most emotional displays -- for example, the tightening of the mouth in disgust, which he thought originated as a response to tasting spoiled food. But the original purpose of emotional tears eluded him. The current study has offered an answer to this riddle: Tears may serve as a chemosignal. Sobel points out that some rodent tears are known to contain such chemical signals. "The uniquely human behavior of emotional tearing may not be so uniquely human after all," he says.

The work was authored by Shani Gelstein, Yaara Yeshurun, Liron Rozenkrantz, Sagit Shushan, Idan Frumin, Yehudah Roth and Noam Sobel, was conducted in collaboration with the Edith Wolfson Medical Center, Holon.

Prof. Noam Sobel's research is supported by the James S. McDonnell Foundation 21st Century Science Scholar in Understanding Human Cognition Program; the Minerva Foundation; the European Research Council; and Regina Wachter, NY.

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Resurrecting the So-Called 'Depression Gene'::Genes May Play Role in Response to Adversity

Resurrecting the So-Called 'Depression Gene'::Genes May Play Role in Response to Adversity

  8:01:00 PM    Science Lover

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University of Michigan Health System researchers have found new evidence that our genes help determine our susceptibility to depression.

Our genes help determine our susceptibility to depression, 
new research suggests. (Credit: iStockphoto/
Nicholas Belton)

Their findings, published online in the Archives of General Psychiatry, challenge a 2009 study that called the genetic link into question and add new support to earlier research hailed as a medical breakthrough.

In the summer of 2003, scientists announced they had discovered a connection between a gene that regulates the neurotransmitter serotonin and an individual's ability to rebound from serious emotional trauma, such as childhood physical or sexual abuse.

The journal Science ranked the findings among the top discoveries of the year and the director of the National Institute of Mental Health proclaimed, "It is a very important discovery and a real advance for the field."

That excitement was dampened in 2009, however, after the research was called into question by a study published in the Journal of the American Medical Association. The New York Times reported that analysis, which examined results from 14 different studies, showed the initial findings had "not held up to scientific scrutiny."

Srijan Sen, M.D., Ph.D, an assistant professor of psychiatry at the University of Michigan Medical School, and his colleagues are presenting a new, broader analysis of the follow-up studies to date. The U-M team examined 54 studies dating from 2001 to 2010 and encompassing nearly 41,000 participants -- making it the largest analysis of the serotonin gene's relationship to depression.

"When we included all the relevant studies, we found that an individual's genetic make-up does make a difference in how he or she responds to stress," says Sen.

The U-M analysis supports previous findings that individuals who had a short allele on a particular area the serotonin gene had a harder time bouncing back from trauma than those with long alleles.

Rudolf Uher, Ph.D., a clinical lecturer at the Institute of Psychiatry in London, says the U-M research will help cut through the debate about the genetic connection and refocus the field on making new advances to help those affected by mental illness.

"The major strength of the analysis is that it is the first such work that included all studies that were available on the topic," Uher says. "And it gives a very clear answer: the 'short' variant of the serotonin transporter does make people more sensitive to the effects of adversity."

The authors of the initial study from 2003 were also excited by the U-M team's results.

"Their careful and systematic approach reveals why the JAMA meta-analysis got it wrong," says Terrie Moffitt, Ph.D., a professor at Duke University and one of the authors of the 2003 study. "We hope that the same journalists who were so hasty to publish a simplistic claim in 2009 will cover this more thoughtful new analysis."

When the U-M team restricted their analysis to the 14 studies included in the 2009 JAMA paper, they also failed to find a genetic link, suggesting to Sen that the scope of the analysis, not the methodology, was responsible for the new findings.

The U-M analysis found robust support for the link between sensitivity to stress and a short allele in those who had been mistreated as children and in people suffering with specific, severe medical conditions. Only a marginal relationship was found in those who had undergone stressful life events.

But that's also common sense. Different stressful life events may have very different effects, Sen says. For instance, there is no reason to think that the effects of divorce, at a biological level, would be similar to the effects of losing your home or being physically assaulted.

Still, the study results don't mean that everyone should run out and get a genetic test; additional susceptibility from having a short allele is only one factor among many that determine how an individual responds to stress, Sen says.

Additional research will help to map an individual's genetic profile for depression.

"This brings us one step closer to being able to identify individuals who might benefit from early interventions or to tailor treatments to specific individuals," Sen says.

Funding: The research was supported by grants from the National Institutes of Health, University of Michigan Depression Center and Studienstiftung des Deutschen Volkes.

Additional U-M Authors: Margit Burmeister, Ph.D., Kerby Shedden, Ph.D., former graduate student Katja Karg

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Your Genome in Minutes: New Technology Could Slash Sequencing Time

Your Genome in Minutes: New Technology Could Slash Sequencing Time

  12:01:00 PM    Science Lover

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Scientists from Imperial College London are developing technology that could ultimately sequence a person's genome in mere minutes, at a fraction of the cost of current commercial techniques.

Dr Joshua Edel shows the prototype chip,
and an array of the chips prior to use.
(Credit: Image courtesy of Imperial College London)

The researchers have patented an early prototype technology that they believe could lead to an ultrafast commercial DNA sequencing tool within ten years. Their work is described in a study published this month in the journal Nano Letters.

The research suggests that scientists could eventually sequence an entire genome in a single lab procedure, whereas at present it can only be sequenced after being broken into pieces in a highly complex and time-consuming process. Fast and inexpensive genome sequencing could allow ordinary people to unlock the secrets of their own DNA, revealing their personal susceptibility to diseases such as Alzheimer's, diabetes and cancer. Medical professionals are already using genome sequencing to understand population-wide health issues and research ways to tailor individualised treatments or preventions.

Dr Joshua Edel, one of the authors on the study from the Department of Chemistry at Imperial College London, said: "Compared with current technology, this device could lead to much cheaper sequencing: just a few dollars, compared with $1m to sequence an entire genome in 2007. We haven't tried it on a whole genome yet but our initial experiments suggest that you could theoretically do a complete scan of the 3,165 million bases in the human genome within minutes, providing huge benefits for medical tests, or DNA profiles for police and security work. It should be significantly faster and more reliable, and would be easy to scale up to create a device with the capacity to read up to 10 million bases per second, versus the typical 10 bases per second you get with the present day single molecule real-time techniques."

In the new study, the researchers demonstrated that it is possible to propel a DNA strand at high speed through a tiny 50 nanometre (nm) hole -- or nanopore -- cut in a silicon chip, using an electrical charge. As the strand emerges from the back of the chip, its coding sequence (bases A, C, T or G) is read by a 'tunnelling electrode junction'. This 2 nm gap between two wires supports an electrical current that interacts with the distinct electrical signal from each base code. A powerful computer can then interpret the base code's signal to construct the genome sequence, making it possible to combine all these well-documented techniques for the first time.

Sequencing using nanopores has long been considered the next big development for DNA technology, thanks to its potential for high speed and high-capacity sequencing. However, designs for an accurate and fast reader have not been demonstrated until now.

Co-author Dr Emanuele Instuli, from the Department of Chemistry at Imperial College London, explained the challenges they faced in this research: "Getting the DNA strand through the nanopore is a bit like sucking up spaghetti. Until now it has been difficult to precisely align the junction and the nanopore. Furthermore, engineering the electrode wires with such dimensions approaches the atomic scale and is effectively at the limit of existing instrumentation. However in this experiment we were able to make two tiny platinum wires into an electrode junction with a gap sufficiently small to allow the electron current to flow between them."

This technology would have several distinct advantages over current techniques, according to co-author, Aleksandar Ivanov from the Department of Chemistry at Imperial College London: "Nanopore sequencing would be a fast, simple procedure, unlike available commercial methods, which require time-consuming and destructive chemical processes to break down and replicate small sections of the DNA molecules to determine their sequence. Additionally, these silicon chips are incredibly durable compared with some of the more delicate materials currently used. They can be handled, washed and reused many times over without degrading their performance."

Dr Tim Albrecht, another author on the study, from the Department of Chemistry at Imperial College London, says: "The next step will be to differentiate between different DNA samples and, ultimately, between individual bases within the DNA strand (ie true sequencing). I think we know the way forward, but it is a challenging project and we have to make many more incremental steps before our vision can be realised."

This work was supported by the Wellcome Trust Translational Award and the Corrigan Foundation.

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